.. DO NOT EDIT.
.. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY.
.. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE:
.. "examples/Data_conversion/plot_csv_to_netcdf.py"
.. LINE NUMBERS ARE GIVEN BELOW.

.. only:: html

    .. note::
        :class: sphx-glr-download-link-note

        Click :ref:`here <sphx_glr_download_examples_Data_conversion_plot_csv_to_netcdf.py>`
        to download the full example code

.. rst-class:: sphx-glr-example-title

.. _sphx_glr_examples_Data_conversion_plot_csv_to_netcdf.py:


CSV to NetCDF conversion
-------------------------
Dataset Reference:
Burton, B.L., Minsley, B.J., Bloss, B.R., and Kress, W.H., 2021, Airborne electromagnetic, magnetic, and radiometric survey of the Mississippi Alluvial Plain, November 2018 - February 2019: U.S. Geological Survey data release, https://doi.org/10.5066/P9XBBBUU.

.. GENERATED FROM PYTHON SOURCE LINES 9-13

.. code-block:: default

    import matplotlib.pyplot as plt
    from os.path import join
    from gspy import Survey








.. GENERATED FROM PYTHON SOURCE LINES 14-16

Convert the CSV data folder to netcdf
++++++++++++++++++++++++++++++++++++++

.. GENERATED FROM PYTHON SOURCE LINES 16-43

.. code-block:: default


    # Path to example files
    data_path = '..//..//supplemental//'

    metadata = data_path + "region//MAP//data//Resolve_survey_information.json"

    # Establish the Survey
    survey = Survey(metadata)

    # Define input CSV-format data file and associated variable mapping file
    d_data = data_path + 'region//MAP//data//Resolve.csv'
    d_supp = data_path + 'region//MAP//data//Resolve_data_information.json'

    # Read data and format as Linedata class object
    survey.add_tabular(type='csv', data_filename=d_data, metadata_file=d_supp)

    # Define input CSV-format model file and associated variable mapping file
    m_data = data_path + 'region//MAP//model//Resolve_model_0.csv'
    m_supp = data_path + 'region//MAP//model//Resolve_model_information.json'

    # Read model data and format as Linemodel class object
    survey.add_tabular(type='csv', data_filename=m_data, metadata_file=m_supp)

    # Save NetCDF file
    d_out = data_path + 'region//MAP//model//Resolve.nc'
    survey.write_netcdf(d_out)





.. rst-class:: sphx-glr-script-out

 Out:

 .. code-block:: none

    DEP_BOT passed dimensions do not align with data, skipping
    THK passed dimensions do not align with data, skipping




.. GENERATED FROM PYTHON SOURCE LINES 44-45

Read in the netcdf files

.. GENERATED FROM PYTHON SOURCE LINES 45-47

.. code-block:: default

    new_survey = Survey().read_netcdf(d_out)








.. GENERATED FROM PYTHON SOURCE LINES 48-49

Plotting

.. GENERATED FROM PYTHON SOURCE LINES 49-56

.. code-block:: default

    plt.figure()
    new_survey.tabular[0].scatter('DTM', vmin=30, vmax=50)
    plt.xlim([500000, 540000])
    plt.ylim([1175000, 1210000])

    plt.figure()
    new_survey.tabular[1].scatter('DEM')
    plt.show()


.. rst-class:: sphx-glr-horizontal


    *

      .. image-sg:: /examples/Data_conversion/images/sphx_glr_plot_csv_to_netcdf_001.png
         :alt: spatial_ref = 0.0
         :srcset: /examples/Data_conversion/images/sphx_glr_plot_csv_to_netcdf_001.png
         :class: sphx-glr-multi-img

    *

      .. image-sg:: /examples/Data_conversion/images/sphx_glr_plot_csv_to_netcdf_002.png
         :alt: spatial_ref = 0.0
         :srcset: /examples/Data_conversion/images/sphx_glr_plot_csv_to_netcdf_002.png
         :class: sphx-glr-multi-img






.. rst-class:: sphx-glr-timing

   **Total running time of the script:** ( 0 minutes  2.950 seconds)


.. _sphx_glr_download_examples_Data_conversion_plot_csv_to_netcdf.py:


.. only :: html

 .. container:: sphx-glr-footer
    :class: sphx-glr-footer-example



  .. container:: sphx-glr-download sphx-glr-download-python

     :download:`Download Python source code: plot_csv_to_netcdf.py <plot_csv_to_netcdf.py>`



  .. container:: sphx-glr-download sphx-glr-download-jupyter

     :download:`Download Jupyter notebook: plot_csv_to_netcdf.ipynb <plot_csv_to_netcdf.ipynb>`


.. only:: html

 .. rst-class:: sphx-glr-signature

    `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_